PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10018145m
Common NameCICLE_v10018145mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family G2-like
Protein Properties Length: 281aa    MW: 32141.3 Da    PI: 10.7754
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10018145mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65e-323689255
          G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     prlrWt +LH++Fv+a+e+LGG+e+AtPk +l++m+vkgLt++hvkSHLQ+YR+
  Ciclev10018145m 36 PRLRWTADLHRSFVHAIERLGGEERATPKLVLQIMGVKGLTISHVKSHLQMYRS 89
                     8****************************************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-303289IPR009057Homeodomain-like
PROSITE profilePS512949.7693292IPR017930Myb domain
SuperFamilySSF466895.38E-153489IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-233689IPR006447Myb domain, plants
PfamPF002495.5E-83788IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MNSTRLRTID DYKNKNPPQS SLKSPSVRPY VRSKMPRLRW TADLHRSFVH AIERLGGEER  60
ATPKLVLQIM GVKGLTISHV KSHLQMYRSL KYEQMIHEAA KATNKNDKVL EAPTTACQQD  120
QHPTKCLSWR KNKNNTQKHQ GFGTQRYNEG LGHHLMNNAN IPPAYWSVMM LITVISAKKL  180
VLLDICISNQ SVGISNSVYF KIICRKGKHP IWINGRQVMF NEPLSYGRVT KKQMERTDNS  240
FLLFNDQLKN CATQQVNFSP SSSLRQNKLI LKHCSKLAKI *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006449755.10.0hypothetical protein CICLE_v10018145mg
TrEMBLV4UFN80.0V4UFN8_9R
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36328184
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.14e-31G2-like family protein